Published works affiliated with MarkoLab

Hidden behavioral fingerprints in epilepsy

Gschwind T, Zeine A, Raikov I, Markowitz JE, Gillis WF, Felong S, Isom LL, Datta SR, Soltesz I.

Neuron June, 2023

Abstract

Epilepsy is a major disorder affecting millions of people. Although modern electrophysiological and imaging approaches provide high-resolution access to the multi-scale brain circuit malfunctions in epilepsy, our understanding of how behavior changes with epilepsy has remained rudimentary. As a result, screening for new therapies for children and adults with devastating epilepsies still relies on the inherently subjective, semi-quantitative assessment of a handful of pre-selected behavioral signs of epilepsy in animal models. Here, we use machine learning-assisted 3D video analysis to reveal hidden behavioral phenotypes in mice with acquired and genetic epilepsies and track their alterations during post-insult epileptogenesis and in response to anti-epileptic drugs. These results show the persistent reconfiguration of behavioral fingerprints in epilepsy and indicate that they can be employed for rapid, automated anti-epileptic drug testing at scale.

Keywords: 3D video; behavior; biomarkers; drug screening; epilepsy; machine learning; phenotyping.

Copyright © 2023 The Author(s). Published by Elsevier Inc. All rights reserved.

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Other Publications

An optogenetics-compatible red fluorescent calcium indicator with negligible blue light photoactivation

Zhang X, Addison BR, Ulutas EZ, Deng CM, Doshi S, Nabhan S, Emanuel AJ, Markowitz JE, Koveal D

BioRxiv March, 2026

High-resolution in vivo kinematic tracking with injectable fluorescent nanoparticles

Ulutas EZ, Pradhan A, Koveal D, Markowitz JE.

Science Advances October, 2025

Act natural: a review of new methods for assessing dopamine’s role in natural behavior

Markowitz JE.

Current Opinion in Behavioral Sciences May, 2025